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Le laboratoire Structure et Instabilité des génomes UMR 7196 / U1154 est une unité mixte de recherche sous la co-tutelle du Muséum national d'Histoire naturelle, du Centre national de la Recherche Scientifique (CNRS), et de l’Institut national de la santé et de la recherche médicale (Inserm).
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UMR 7196 - U1154 - Structure et Instabilité des Génomes
UMR 7196 - U1154

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Guidi Micol, Ruault Myriam, Marbouty Martial, Loïodice Isabelle, Cournac Axel, Billaudeau Cyrille, Hocher Antoine, Mozziconacci Julien, Koszul Romain & Taddei Angela, September 2015 — Spatial reorganization of telomeres in long-lived quiescent cells. Genome Biology vol. 16, n° 1, dir. {BioMed Central} p. 206
https://dx.doi.org/10.1186/s13059-015-0766-2
Cournac Axel, Marie-Nelly Hervé, Marbouty Martial, Koszul Romain & Mozziconacci Julien, 2012 — Normalization of a chromosomal contact map. BMC Genomics vol. 13, n° 1, dir. {BioMed Central} p. 436
https://dx.doi.org/10.1186/1471-2164-13-436
Lesne Annick, Riposo Julien, Roger Paul, Cournac Axel & Mozziconacci Julien, 2014 — 3D genome reconstruction from chromosomal contacts. Nature Methods vol. 11, , dir. {Nature Publishing Group} p. 1141-1143
https://dx.doi.org/10.1038/NMETH.3104
Khodabandelou Ghazaleh, Routhier Etienne & Mozziconacci Julien, June 2020 — Distributed under Creative Commons CC-BY 4.0 Genome annotation across species using deep convolutional neural networks. PeerJ Computer Science vol. 6, , dir. {PeerJ} e278
https://dx.doi.org/10.7717/peerj-cs.278
Scolari Vittore F, Mercy Guillaume, Koszul Romain, Lesne Annick & Mozziconacci Julien, August 2018 — Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer. Physical Review Letters vol. 121, n° 5, dir. {American Physical Society} p. 057801
https://dx.doi.org/10.1103/PhysRevLett.121.057801
Mercy Guillaume, Mozziconacci Julien, Scolari Vittore F, Yang Kun, Zhao Guanghou, Thierry Agnès, Luo Yi, Mitchell Leslie A, Shen Michael, Shen Yue, Walker Roy, Zhang Weimin, Wu Yi, Xie Ze-Xiong, Luo Zhouqing et al., March 2017 — 3D organization of synthetic and scrambled chromosomes. Science vol. 355, n° 6329, dir. {American Association for the Advancement of Science} eaaf4597
https://dx.doi.org/10.1126/science.aaf4597
Albert Benjamin, Mathon Julien, Shukla Ashutosh, Saad Hicham, Normand Christophe, Léger-Silvestre Isabelle, Villa David, Kamgoué Alain, Mozziconacci Julien, Wong Hua, Zimmer Christophe, Bhargava Purnima, Bancaud Aurélien & Gadal Olivier, 2013 — Systematic characterization of the conformation and dynamics of budding yeast chromosome XII. Journal of Cell Biology vol. 202, n° 2, dir. {Rockefeller University Press} p. 201-210
https://dx.doi.org/10.1083/jcb.201208186
Hajjoul Houssam, Mathon Julien, Ranchon Hubert, Carrivain Pascal, Goiffon Isabelle, Mozziconacci Julien, Albert Benjamin, Victor Jean-Marc, Gadal Olivier, Bystricky Kerstin & Bancaud Aurélien, November 2013 — High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome. Genome Research vol. 23, n° 11, dir. {Cold Spring Harbor Laboratory Press} p. 1829-1838
https://dx.doi.org/10.1101/gr.157008.113
Wang Renjie, Mozziconacci Julien, Bancaud Aurélien & Gadal Olivier, June 2015 — Principles of chromatin organization in yeast: relevance of polymer models to describe nuclear organization and dynamics. Current Opinion in Cell Biology vol. 34, , dir. {Elsevier} p. 54-60
https://dx.doi.org/10.1016/j.ceb.2015.04.004
Lioy Virginia S., Cournac Axel, Marbouty Martial, Duigou Stéphane, Mozziconacci Julien, Espéli Olivier, Boccard Frédéric & Koszul Romain, February 2018 — Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins. Cell vol. 172, n° 4, dir. {Elsevier} 771–783.e18
https://dx.doi.org/10.1016/j.cell.2017.12.027
Muller Héloise, Scolari Vittore F, Agier Nicolas, Piazza Aurele, Thierry Agnès, Mercy Guillaume, Descorps-Declere Stéphane, Lazar-Stefanita Luciana, Espéli Olivier, Llorente Bertrand, Fischer Gilles, Mozziconacci Julien & Koszul Romain, July 2018 — Characterizing meiotic chromosomes’ structure and pairing using a designer sequence optimized for Hi-C. Molecular Systems Biology vol. 14, n° 7, dir. {EMBO Press} e8293
https://dx.doi.org/10.15252/msb.20188293
Jablonski Kim Philipp, Carron Leopold, Mozziconacci Julien, Forné Thierry, Hütt Marc-Thorsten & Lesne Annick, January 2022 — Contribution of 3D genome topological domains to genetic risk of cancers: a genome-wide computational study. Human Genomics vol. 16, n° 1, dir. {BioMed Central} p. 2
https://dx.doi.org/10.1186/s40246-022-00375-2
Astrid Lancrey, Alexandra Joubert, Evelyne Duvernois-Berthet, Etienne Routhier, Saurabh Raj, Agnès Thierry, Marta Sigarteu, Loic Ponger, Vincent Croquette, Julien Mozziconacci, Jean-Baptiste Boulé, 2022 — Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae. Journal of Molecular Biology vol. 434, n° 1, p. 15
https://dx.doi.org/167497
Bignaud Amaury, Cockram Charlotte, Borde Céline, Groseille Justine, Allemand Eric, Thierry Agnès, Marbouty Martial, Mozziconacci Julien, Espéli Olivier & Koszul Romain, January 2024 — Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes. Nature Structural and Molecular Biology , ,
https://dx.doi.org/10.1038/s41594-023-01178-2
Luo Jingchuan, Vale-Silva Luis A, Raghavan Adhithi R, Mercy Guillaume, Heldrich Jonna, Sun Xiaoji, Li Mingyu Kenneth, Zhang Weimin, Agmon Neta, Yang Kun, Cai Jitong, Stracquadanio Giovanni, Thierry Agnès, Zhao Yu, Coelho Camila et al., November 2023 — Synthetic chromosome fusion: Effects on mitotic and meiotic genome structure and function. Cell Genomics vol. 3, n° 11, p. 100439
https://dx.doi.org/10.1016/j.xgen.2023.100439
Westbrook Alex, Routhier Etienne, Mozziconacci Julien, Koszul Romain & Boulé Jean-Baptiste, November 2023 — Nucleosome positioning in yeast: from prediction to synthetic design. , , Poster
https://mnhn.hal.science/mnhn-04344672
Routhier Ethienne, Joubert Alexandra, Westbrook Alex, Pierre Edgar, Lancrey Astrid, Cariou Marie, Boulé Jean-Baptiste & Mozziconacci Julien, 2023 — In silico design of DNA sequences for in vivo nucleosome positioning. Nucleic Acids Research vol. 52, n° 12,
https://dx.doi.org/10.1093/nar/gkae468
Carron Léoplod, Concia Lorenzo, Grob Stefan, Barneche Fredy, Carbone Alessandra & Mozziconacci Julien, November 2023 — A layer cake model for plant and metazoan chromatin. , , working paper or preprint
https://dx.doi.org/10.1101/2023.02.24.529851
Routhier Etienne & Mozziconacci Julien, June 2022 — Genomics enters the deep learning era. PeerJ vol. 10, , e13613
https://dx.doi.org/10.7717/peerj.13613
Carron Leopold, Morlot Jean-Baptiste, Lesne Annick & Mozziconacci Julien, 2022 — The 3D organization of chromatin colors in mammalian nuclei. Methods in Molecular Biology vol. 2301, , p. 317-336
https://dx.doi.org/10.1007/978-1-0716-1390-0\_17
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