Entité de rattachement
Équipe ARChE
Thème interdisciplinaire de recherche
Génomique comparative - bioinformatique

Contact

Courriel
loic.ponger[at]mnhn.fr
Téléphone
01 40 79 36 97
Adresse(s)

CNRS UMR 7196 / INSERM U1154

43, rue Cuvier - Case Postale 26

75231 Paris Cedex 05, France

 

Responsabilités dans l'unité

Responsable pôle informatique

Serre file incendie

Publications

2024
  • Anoud M., Delagoutte Emmanuelle, Helleu Quentin, Brion A., Duvernois-Berthet Evelyne, As M., Marques X., Lamribet K., Senamaud C., Jourdren L., Adrait A., Heinrich S., Toutirais G., Hamlaoui S., Gropplero G. et al., janvier 2024 — Comparative transcriptomics reveal a novel tardigrade specific DNA binding protein induced in response to ionizing radiation. eLife , ,
    https://dx.doi.org/10.7554/eLife.92621.1
2022
  • Boisard Julie, Duvernois-Berthet Evelyne, Duval Linda, Schrével Joseph, Guillou Laure, Labat Amandine, Le Panse Sophie, Prensier Gérard, Ponger Loïc & Florent Isabelle, décembre 2022 — Marine gregarine genomes reveal the breadth of apicomplexan diversity with a partially conserved glideosome machinery. BMC Genomics vol. 23, n° 1, dir. {BioMed Central} p. 485
    https://dx.doi.org/10.1186/s12864-022-08700-8
  • Carrier Arnaud, Desjobert Cécile, Ponger Loic, Lamant Laurence, Bustos Matias, Torres-Ferreira Jorge, Henrique Rui, Jeronimo Carmen, Lanfrancone Luisa, Delmas Audrey, Favre Gilles, Daunay Antoine, Busato Florence, Hoon Dave Sb, Tost Jorg et al., septembre 2022 — DNA methylome combined with chromosome cluster-oriented analysis provides an early signature for cutaneous melanoma aggressiveness. eLife vol. 11, , e78587
    https://dx.doi.org/10.7554/eLife.78587
  • Lancrey Astrid, Joubert Alexandra, Duvernois-Berthet Evelyne, Routhier Etienne, Raj Saurabh, Thierry Agnès, Sigarteu Marta, Ponger Loic, Croquette Vincent, Mozziconacci Julien & Boulé Jean-Baptiste, avril 2022 — Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae. Journal of Molecular Biology , ,
    https://dx.doi.org/10.1016/j.jmb.2022.167497
2021
  • Haschka Thomas, Ponger Loic, Escude Christophe & Mozziconacci Julien, juin 2021 — MNHN-Tree-Tools: A toolbox for tree inference using multi-scale clustering of a set of sequences. Bioinformatics , , dir. {Oxford University Press (OUP)}
    https://dx.doi.org/10.1093/bioinformatics/btab430
2020
  • Cheikh Albassatneh Marwan, Escudero Marcial, Ponger Loïc, Monnet Anne-Christine, Arroyo Juan, Nikolic Toni, Bacchetta Gianluigi, Bagnoli Francesca, Dimopoulos Panayotis, Leriche Agathe, Medail Frederic, Roig Anne, Spanu Ilaria, Vendramin Giovanni Giuseppe, Hampe Arndt et al., 2020 — A comprehensive, genus-level time-calibrated phylogeny of the tree flora of Mediterranean Europe and an assessment of its vulnerability. Botany Letters vol. 167, n° 2, dir. {Taylor \& Francis} p. 276-289
    https://dx.doi.org/10.1080/23818107.2019.1684360
2018
  • Cacheux Lauriane, Ponger Loïc, Gerbault-Seureau Michèle, Loll François, Gey Delphine, Richard Florence Anne & Escudé Christophe, 2018 — The Targeted Sequencing of Alpha Satellite DNA in Cercopithecus pogonias Provides New Insight Into the Diversity and Dynamics of Centromeric Repeats in Old World Monkeys. Genome Biology and Evolution vol. 10, n° 7, dir. {Society for Molecular Biology and Evolution} p. 1837-1851
    https://dx.doi.org/10.1093/gbe/evy109
2016
  • Cacheux Lauriane, Ponger Loïc, Gerbault-Seureau Michèle, Richard Florence Anne & Escudé Christophe, 2016 — Diversity and distribution of alpha satellite DNA in the genome of an Old World monkey: Cercopithecus solatus. BMC Genomics vol. 17, , dir. {BioMed Central} p. 916
    https://dx.doi.org/10.1186/s12864-016-3246-5
  • Qiao Qin, Le Manach Séverine, Huet Hélène, Duvernois-Berthet Evelyne, Chaouch Soraya, Duval Charlotte, Sotton Benoit, Ponger Loïc, Marie Arul, Mathéron Lucrèce, Lennon Sarah, Bolbach Gérard, Djediat Chakib, Bernard Cécile, Edery Marc et al., 2016 — An integrated omic analysis of hepatic alteration in medaka fish chronically exposed to cyanotoxins with possible mechanisms of reproductive toxicity. Environmental Pollution vol. 219, , dir. {Elsevier} p. 119-131
    https://dx.doi.org/10.1016/j.envpol.2016.10.029
  • Qiao Qin, Le Manach Séverine, Sotton Benoit, Huet Hélène, Duvernois-Berthet Evelyne, Paris Alain, Duval Charlotte, Ponger Loïc, Marie Arul, Blond Alain, Mathéron Lucrèce, Vinh Joelle, Bolbach Gérard, Djediat Chakib, Bernard Cécile et al., 2016 — Deep sexual dimorphism in adult medaka fish liver highlighted by multi-omic approach. Scientific Reports vol. 6, , dir. {Nature Publishing Group} p. 32459
    https://dx.doi.org/10.1038/srep32459
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