Mozziconacci Julien & Laine Élodie, avril 2026 — Comment l’IA apprend le langage secret de l’ADN, et ce que la recherche y gagne. , ,
https://dx.doi.org/10.64628/AAK.x45jqwerp
Identifiant HAL
hal-05735955
Laine Élodie & Mozziconacci Julien, mars 2026 — AlphaGenome, une nouvelle avancée en intelligence artificielle pour explorer les effets des mutations génétiques. , ,
https://dx.doi.org/10.64628/AAK.vc7uw5w7p
Identifiant HAL
hal-05735945
Ganesh Gautham, Fiche Jean-Bernard, Nöllmann Marcelo & Mozziconacci Julien, novembre 2025 — Criticality-driven enhancer-promoter dynamics in Drosophila chromosomes. , , working paper or preprint
https://dx.doi.org/10.1101/2025.06.20.660702
Identifiant HAL
hal-05358669
Christophe Maxime, Altamirano-Pacheco Luis, Navarro Pablo & Mozziconacci Julien, juillet 2025 — Interpretable deep learning reveals sequence determinants of nucleosome positioning in mouse genome. , , Poster
https://hal.science/hal-05285046
Identifiant HAL
hal-05285046
Meneu Léa, Chapard Christophe, Serizay Jacques, Westbrook Alex, Routhier Etienne, Ruault Myriam, Perrot Manon, Minakakis Alexandros, Girard Fabien, Bignaud Amaury, Even Antoine, Gourgues Géraldine, Libri Domenico, Lartigue Carole, Piazza Aurèle et al., mars 2025 — Sequence-dependent activity and compartmentalization of foreign DNA in a eukaryotic nucleus. Science vol. 387, n° 6734, eadm9466
https://dx.doi.org/10.1126/science.adm9466
Identifiant HAL
hal-04937691
Gil José, Navarrete Emily, Rosin L.F., Chowdhury Neil, Abraham Sameer, Cornilleau Gaétan, Lei E.P., Mozziconacci Julien, Mirny L.A., Muller Héloïse & Drinnenberg I.A., juillet 2024 — Unique territorial and compartmental organization of chromosomes in the holocentric silkmoth. , , working paper or preprint
https://dx.doi.org/10.1101/2023.09.14.557757
Identifiant HAL
hal-04658951
Anoud Marwan, Delagoutte Emmanuelle, Helleu Quentin, Brion Alice, Duvernois-Berthet Evelyne, As Marie, Marques Xavier, Lamribet Khadija, Senamaud-Beaufort Catherine, Jourdren Laurent & others, 2024 — Comparative transcriptomics reveal a novel tardigrade-specific DNA-binding protein induced in response to ionizing radiation. Elife vol. 13, , RP92621
Bignaud Amaury, Cockram Charlotte, Borde Céline, Groseille Justine, Allemand Eric, Thierry Agnès, Marbouty Martial, Mozziconacci Julien, Espéli Olivier & Koszul Romain, janvier 2024 — Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes. Nature Structural and Molecular Biology , ,
https://dx.doi.org/10.1038/s41594-023-01178-2
Anoud M., Delagoutte Emmanuelle, Helleu Quentin, Brion A., Duvernois-Berthet Evelyne, As M., Marques X., Lamribet K., Senamaud C., Jourdren L., Adrait A., Heinrich S., Toutirais G., Hamlaoui S., Gropplero G. et al., janvier 2024 — Comparative transcriptomics reveal a novel tardigrade specific DNA binding protein induced in response to ionizing radiation. eLife , ,
https://dx.doi.org/10.7554/eLife.92621.1
Luo Jingchuan, Vale-Silva Luis A, Raghavan Adhithi R, Mercy Guillaume, Heldrich Jonna, Sun Xiaoji, Li Mingyu Kenneth, Zhang Weimin, Agmon Neta, Yang Kun, Cai Jitong, Stracquadanio Giovanni, Thierry Agnès, Zhao Yu, Coelho Camila et al., novembre 2023 — Synthetic chromosome fusion: Effects on mitotic and meiotic genome structure and function. Cell Genomics vol. 3, n° 11, p. 100439
https://dx.doi.org/10.1016/j.xgen.2023.100439
Westbrook Alex, Routhier Etienne, Mozziconacci Julien, Koszul Romain & Boulé Jean-Baptiste, novembre 2023 — Nucleosome positioning in yeast: from prediction to synthetic design. , , Poster
https://mnhn.hal.science/mnhn-04344672
Carron Léoplod, Concia Lorenzo, Grob Stefan, Barneche Fredy, Carbone Alessandra & Mozziconacci Julien, novembre 2023 — A layer cake model for plant and metazoan chromatin. , , working paper or preprint
https://dx.doi.org/10.1101/2023.02.24.529851
Westbrook Alex, Routhier Etienne, Mozziconacci Julien, Koszul Romain & Boulé Jean-Baptiste, novembre 2023 — Nucleosome positioning in yeast: from prediction to synthetic design. , , Poster
https://mnhn.hal.science/mnhn-04344672
Identifiant HAL
mnhn-04344672
Paupiah Anne-Lise, Marques Xavier, Merlaud Zaha, Russeau Marion, Levi Sabine & Renner Marianne, 2023 — Introducing Diinamic, a flexible and robust method for clustering analysis in single-molecule localization microscopy. Biological Imaging vol. 3, , e14
https://dx.doi.org/10.1017/S2633903X23000156
Routhier Ethienne, Joubert Alexandra, Westbrook Alex, Pierre Edgar, Lancrey Astrid, Cariou Marie, Boulé Jean-Baptiste & Mozziconacci Julien, 2023 — In silico design of DNA sequences for in vivo nucleosome positioning. Nucleic Acids Research vol. 52, n° 12,
https://dx.doi.org/10.1093/nar/gkae468
Boisard Julie, Duvernois-Berthet Evelyne, Duval Linda, Schrével Joseph, Guillou Laure, Labat Amandine, Le Panse Sophie, Prensier Gérard, Ponger Loïc & Florent Isabelle, décembre 2022 — Marine gregarine genomes reveal the breadth of apicomplexan diversity with a partially conserved glideosome machinery. BMC Genomics vol. 23, n° 1, dir. {BioMed Central} p. 485
https://dx.doi.org/10.1186/s12864-022-08700-8
Carrier Arnaud, Desjobert Cécile, Ponger Loic, Lamant Laurence, Bustos Matias, Torres-Ferreira Jorge, Henrique Rui, Jeronimo Carmen, Lanfrancone Luisa, Delmas Audrey, Favre Gilles, Daunay Antoine, Busato Florence, Hoon Dave Sb, Tost Jorg et al., septembre 2022 — DNA methylome combined with chromosome cluster-oriented analysis provides an early signature for cutaneous melanoma aggressiveness. eLife vol. 11, , e78587
https://dx.doi.org/10.7554/eLife.78587
Lazar-Stefanita Luciana, Luo Jingchuan, Montagne Remi, Thierry Agnes, Sun Xiaoji, Mercy Guillaume, Mozziconacci Julien, Koszul Romain & Boeke Jef D, août 2022 — Karyotype engineering reveals spatio-temporal control of replication firing and gene contacts. Cell Genomics vol. 2, n° 8, p. 100163
https://dx.doi.org/10.1016/j.xgen.2022.100163
Lancrey Astrid, Joubert Alexandra, Duvernois-Berthet Evelyne, Routhier Etienne, Raj Saurabh, Thierry Agnès, Sigarteu Marta, Ponger Loic, Croquette Vincent, Mozziconacci Julien & Boulé Jean-Baptiste, avril 2022 — Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae. Journal of Molecular Biology , ,
https://dx.doi.org/10.1016/j.jmb.2022.167497