Liste des publications
Carron Leopold, Morlot Jean-Baptiste, Lesne Annick & Mozziconacci Julien, 2021 — The 3D organization of chromatin colors in mammalian nuclei. Methods in Molecular Biology. Dir. Humana Press/Springer Imprint.
https://hal.archives-ouvertes.fr/hal-03172656
Decombe Sheldon, Loll François, Caccianini Laura, Affannoukoué Kévin, Izeddin Ignacio, Mozziconacci Julien, Escudé Christophe & Lopes Judith, Juillet 2021 — Epigenetic rewriting at centromeric DNA repeats leads to increased chromatin accessibility and chromosomal instability. Epigenetics & Chromatin. Vol. 14, n° 1, dir. BioMed Central.
https://dx.doi.org/10.1186/s13072-021-00410-x
Haschka Thomas, Baptiste Morlot Jean, Carron Leopold & Mozziconacci Julien, Juillet 2021 — Improving distance measures between genomic tracks with mutual proximity. Briefings in Bioinformatics. Dir. Oxford University Press (OUP).
https://dx.doi.org/10.1093/bib/bbab266
Routhier Etienne, Pierre Edgard, Khodabandelou Ghazaleh & Mozziconacci Julien, Mars 2021 — Genome-wide prediction of DNA mutation effect on nucleosome positions for yeast synthetic genomics. Genome Research. Vol. 31, n° 2, dir. Cold Spring Harbor Laboratory Press, p. 317-326.
https://dx.doi.org/10.1101/gr.264416.120
Cheikh Albassatneh Marwan, Escudero Marcial, Ponger Loïc, Monnet Anne-Christine, Arroyo Juan, Nikolic Toni, Bacchetta Gianluigi, Bagnoli Francesca, Dimopoulos Panayotis, Leriche Agathe, Medail Frederic, Roig Anne, Spanu Ilaria, Vendramin Giovanni Giuseppe, Hampe Arndt et al., 2020 — A comprehensive, genus-level time-calibrated phylogeny of the tree flora of Mediterranean Europe and an assessment of its vulnerability. Botany Letters. Vol. 167, n° 2, dir. Taylor \\& Francis, p. 276-289.
https://dx.doi.org/10.1080/23818107.2019.1684360
Khodabandelou Ghazaleh, Routhier Etienne & Mozziconacci Julien, Juin 2020 — Distributed under Creative Commons CC-BY 4.0 Genome annotation across species using deep convolutional neural networks. PeerJ Computer Science. Vol. 6, dir. PeerJ, e278.
https://dx.doi.org/10.7717/peerj-cs.278
Lesne Annick & Mozziconacci Julien, Avril 2019 — « Formes mathématiques, formes physiques, formes vivantes » in Le Rêve de Formes. Arts, Sciences ... et Cie,. Dir. Le Seuil.
https://hal.archives-ouvertes.fr/hal-02308929
Merle Mélody, Messio Laura & Mozziconacci Julien, Octobre 2019 — Turing-like patterns in an asymmetric dynamic Ising model. Physical Review E. Vol. 100, n° 4, dir. American Physical Society (APS).
https://dx.doi.org/10.1103/PhysRevE.100.042111
Mozziconacci Julien, Merle Mélody & Lesne Annick, Novembre 2019 — The 3D genome shapes the regulatory code of developmental genes. Journal of Molecular Biology. Dir. Elsevier.
https://dx.doi.org/10.1016/j.jmb.2019.10.017
Baudement Marie, Cournac Axel, Court Franck, Seveno Marie, Parrinello Hugues, Reynes Christelle, Sabatier Robert, Bouschet Tristan, Yi Zhou, Sallis Sephora, Tancelin Mathilde, Rebouissou Cosette, Cathala Guy, Lesne Annick, Mozziconacci Julien et al., Novembre 2018 — High-salt Recovered Sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies. Genome Research. Vol. 28, n° 11, dir. Cold Spring Harbor Laboratory Press, p. 1733-1746.
https://dx.doi.org/10.1101/gr.237073.118
Cacheux Lauriane, Ponger Loïc, Gerbault-Seureau Michèle, Loll François, Gey Delphine, Richard Florence Anne & Escudé Christophe, 2018 — The Targeted Sequencing of Alpha Satellite DNA in Cercopithecus pogonias Provides New Insight Into the Diversity and Dynamics of Centromeric Repeats in Old World Monkeys. Genome Biology and Evolution. Vol. 10, n° 7, dir. Society for Molecular Biology and Evolution, p. 1837-1851.
https://dx.doi.org/10.1093/gbe/evy109
Lioy Virginia S., Cournac Axel, Marbouty Martial, Duigou Stéphane, Mozziconacci Julien, Espéli Olivier, Boccard Frédéric & Koszul Romain, Février 2018 — Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins. Cell. Vol. 172, n° 4, dir. Elsevier, 771–783.e18.
https://dx.doi.org/10.1016/j.cell.2017.12.027
Muller Héloise, Scolari Vittore F, Agier Nicolas, Piazza Aurele, Thierry Agnès, Mercy Guillaume, Descorps-Declere Stéphane, Lazar-Stefanita Luciana, Espéli Olivier, Llorente Bertrand, Fischer Gilles, Mozziconacci Julien & Koszul Romain, Juillet 2018 — Characterizing meiotic chromosomes’ structure and pairing using a designer sequence optimized for Hi-C. Molecular Systems Biology. Vol. 14, n° 7, dir. EMBO Press, e8293.
https://dx.doi.org/10.15252/msb.20188293
Scolari Vittore F, Mercy Guillaume, Koszul Romain, Lesne Annick & Mozziconacci Julien, Août 2018 — Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer. Physical Review Letters. Vol. 121, n° 5, dir. American Physical Society, p. 057801.
https://dx.doi.org/10.1103/PhysRevLett.121.057801
Hubstenberger Arnaud, Courel Maïté, Bénard Marianne, Souquère Sylvie, Ernoult-Lange Michèle M., Chouaib Racha, Yi Zhou, Morlot Jean-Baptiste, Munier Annie, Fradet Magali, Daunesse Maëlle, Bertrand Edouard, Pierron Gérard, Mozziconacci Julien, Kress Michel et al., Octobre 2017 — P-Body Purification Reveals the Condensation of Repressed mRNA Regulons. Molecular Cell. Vol. 68, n° 1, dir. Elsevier, 144-157.e5.
https://dx.doi.org/10.1016/j.molcel.2017.09.003
Lazar-Stefanita Luciana, Scolari Vittore F, Mercy Guillaume, Muller Héloïse, Guérin Thomas M M, Thierry Agnès, Mozziconacci Julien & Koszul Romain, Septembre 2017 — Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle. EMBO Journal. Vol. 36, n° 18, dir. EMBO Press, p. 2684-2697.
https://dx.doi.org/10.15252/embj.201797342
Mercy Guillaume, Mozziconacci Julien, Scolari Vittore F, Yang Kun, Zhao Guanghou, Thierry Agnès, Luo Yi, Mitchell Leslie A, Shen Michael, Shen Yue, Walker Roy, Zhang Weimin, Wu Yi, Xie Ze-Xiong, Luo Zhouqing et al., Mars 2017 — 3D organization of synthetic and scrambled chromosomes. Science. Vol. 355, n° 6329, dir. American Association for the Advancement of Science, eaaf4597.
https://dx.doi.org/10.1126/science.aaf4597
Cacheux Lauriane, Ponger Loïc, Gerbault-Seureau Michèle, Richard Florence Anne & Escudé Christophe, 2016 — Diversity and distribution of alpha satellite DNA in the genome of an Old World monkey: Cercopithecus solatus. BMC Genomics. Vol. 17, dir. BioMed Central, p. 916.
https://dx.doi.org/10.1186/s12864-016-3246-5
Cournac Axel, Koszul Romain & Mozziconacci Julien, Janvier 2016 — The 3D folding of metazoan genomes correlates with the association of similar repetitive elements. Nucleic Acids Research. Vol. 44, n° 1, dir. Oxford University Press, p. 245-255.
https://dx.doi.org/10.1093/nar/gkv1292
Cournac Axel, Marbouty Martial, Mozziconacci Julien & Koszul Romain, 2016 — Generation and Analysis of Chromosomal Contact Maps of Yeast Species.. Methods in Molecular Biology. Vol. 1361, dir. Humana Press/Springer Imprint, p. 227-45.
https://dx.doi.org/10.1007/978-1-4939-3079-1_13